FABI News

FABI Events

FABI in a nutshell

Research Features

FABI, the Forestry and Agricultural Biotechnology Institute, at the University of Pretoria, is a post-graduate research institute that was established in 1997, based on a recognition that the future of forestry and agriculture in South Africa will strongly depend on the incorporation of new and emerging technologies into these industries. Major opportunities for these industries have emerged in recent times, from the applications of biotechnology and bioinformatics, amongst many others. FABI scientists undertake goal-directed research, in partnership with major players in the forestry and agricultural sectors in South Africa and in so doing, promote both human capital and industrial development in the country.

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FABI, the Forestry and Agricultural Biotechnology Institute, at the University of Pretoria, is a post-graduate research institute that was established in 1997, based on a recognition that the future of forestry and agriculture in South Africa will strongly depend on the incorporation of new and emerging technologies into these industries. Major opportunities for these industries have emerged in recent times, from the applications of biotechnology and bioinformatics, amongst many others. FABI scientists undertake goal-directed research, in partnership with major players in the forestry and agricultural sectors in South Africa and in so doing, promote both human capital and industrial development in the country.

Being based at the University of Pretoria provides FABI with the capacity to build future human resources in biotechnology, that are crucial to the future of forestry and agriculture in South Africa. It also enables collaboration and linkage with the majority of statutory bodies undertaking research in the plant and animal sciences. Additional value comes from training grants, participation of students in research programmes, and an enormous human and technological resource associated with this University.

Staff at the University of Pretoria linked to FABI, have also had long-term associations with the fruit tree industry as well as with many other programmes linked to agricultural and forestry crops. Since its establishment, FABI has grown rapidly. FABI is made up of about 240 people including, more than 20 academic staff, 150+ postgraduate (Hons, MSc, PhD) students, postdoctoral fellows, research visitors, and a small core of technical and support staff. Approximately 30 languages are spoken by members of the FABI Team, illustrating a remarkably multinational and multicultural group.


New Publications

Cho SE, Seo ST, Nam Y, Wingfield MJ, Lee DY. (2024) Chalaropsis pruni sp. nov. (Ceratocystidaceae), a new species from Prunus serrulata var. pubescens in South Korea. Phytotaxa 671(2):191-197. 10.11646/phytotaxa.671.2.8
Balocchi F, Wingfield MJ, Paap T. (2024) First Report of Fusarium Wilt and Pink Rot of Phoenix canariensis in South Africa. Forest Pathology 10.1111/efp.70001 PDF
Makunde PT, Slippers B, Hurley BP. (2024) Exploring the diversity of leafrollers (Lepidoptera: Tortricidae) associated with eucalypts in South African forestry nurseries and plantations, with a new report of Strepsicrates sp.. Southern Forests 86(4):1-8. 10.2989/20702620.2024.2394219
Fuchs T, Visagie CM, Wingfield BD, Wingfield MJ. (2024) Sporothrix and Sporotrichosis: A South African perspective on a growing global health threat. Mycoses 67(10):e13806. 10.1111/myc.13806
van Heerden A, Pham NQ, Wingfield BD, Wingfield MJ, Wilken PM. (2024) Six type-I PKS classes and highly conserved melanin and elsinochrome gene clusters found in diverse Elsinoë species. BMC Genomics 25:990. 10.1186/s12864-024-10920-z
Makunde PT, Slippers B, Hurley BP. (2024) First report of the giant conifer aphid, Cinara pinivora (Wilson) and the Monterey pine aphid, Essigella californica (Essig) (Hemiptera: Aphididae) in South Africa. Southern Forests 86:1-5. 10.2989/20702620.2024.2394218
Pham NQ, Wingfield BD, Barnes I, Gazis R, Wingfield MJ. (2024) Elsinoe species: The rise of scab diseases. Plant Pathology 10.1111/ppa.14015
Tembo M, Mahlangu JNN, Berger DK, Chimutingiza H, Chikoti PC, Prasanna BM, Suresh LM, Nsibo DL. (2024) First report of Bipolaris yamadae and Exserohilum rostrum associated with leaf spots of maize (Zea maydis) in Zambia. Plant Disease 108(9):2931. 10.1094/PDIS-05-24-1116-PDN
Vilanova L, Caballol M, Zhang K, Olson Å, Barnes I, Wingfield MJ, Oliva J. (2024) New simple sequence repeat markers reveal undetected diversity in Spanish and Californian Diplodia sapinea populations. Fungal Genetics and Biology 175:103937. 10.1016/j.fgb.2024.103937
Hough B, Wingfield B, Read DA. (2024) Identification and characterization of mycoviruses in transcriptomes from the fungal family Ceratocystidaceae. Virus Genes 10.1007/s11262-024-02112-4 PDF
Bose T, Mahomed TG, Mbatha KC, Joubert JC, Hammerbacher A. (2024) Tissue ontogeny and chemical composition influence bacterial biodiversity in the wood and shoot tip of Populus nigra. Plant Biology :1-11. 10.1111/plb.13724
Aylward J, Marincowitz S, Basson RJ, Rippon W, Wingfield MJ, Roets F. (2024) Four new Geosmithia species from bark beetles infesting indigenous South African trees. Fungal Biology 10.1016/j.funbio.2024.09.006
Nel WJ, Randolph C, Paap T, Hurley BP, Slippers B, Barnes I, Wingfield MJ. (2024) Fusarium species associated with Euwallacea xanthopus in South Africa, including two novel species. Mycologia :1-20. 10.1080/00275514.2024.2394758
Read DA, Pietersen G, Slippers B, Steenkamp E. (2024) Genomic characterization of novel viruses associated with Olea europaea L. in South Africa. Archives of Virology 169 10.1007/s00705-024-06132-1 PDF
Swalarsk-Parry BS, De Vos L, Fru FF, Santana QC, van der Nest MA, Wingfield BD, Wingfield MJ, Herron DA, Ramaswe JB, Dewing C, Sayari M, van der Merwe NA, van Wyk S, Lane FA, Wilson AM, Adegeye OO, Soal NC, Price J-L, Steenkamp ET. (2024) Wide variation in aggressiveness and growth in South African Fusarium circinatum isolates with geographical origin as the primary determinant. Southern Forests: a Journal of Forest Science 10.2989/20702620.2024.2363749
Lin L, Fan XL, Groenewald JZ, Jami F, Wingfield MJ, Voglmayer H, Jaklitsch W, Castlebury LA, Tian CM, Crous PW. (2024) Cytospora: an important genus of canker pathogens. Studies in Mycology 109:323-401. PDF
Cortina-Escribano M, Veteli P, Wingfield MJ, Wingfield BD, Coetzee MPA, Vanhanen H, Linnakoski R. (2024) Phylogenetic analysis and morphological characteristics of lactate Ganoderma specimens in Finland. Mycologia 10.1080/00275514.2024.2381424
van der Nest MA, Steenkamp ET, De Vos L, Wienk R, Swart V, van den Berg N. (2024) Complete mitochondrial genome sequence of the white root rot pathogen Dematophora necatrix (Xylariaceae: Xylariales). Mitochondrial DNA Part B: Resoures 9(9):1207-1212. 10.1080/23802359.2024.2403411
Nkomo T, Bose T, Wingfield BD, Knoppersen R, Mbhele O, Nemesio‐Gorriz M, Rodas CA, Paetz C, Cilliers CT, Ferreira MA, Hammerbacher A. (2024) Geographic location shapes fungal communities associated with Epidendrum roots. Mycological Progress 23:54. 10.1007/s11557-024-01990-0
Visagie CM, Houbraken J, Yilmaz N. (2024) The re-identification of Penicillium and Talaromyces (Eurotiales) catalogued in South African culture collections. Persoonia 53:29–61. 10.3767/persoonia.2024.53.02
Maduke N, Slippers B, Van der Linde E, Wingfield M, Fourie G. (2024) Botryosphaeriaceae species associated with branch dieback and decline of macadamia trees in South Africa. Australasian Plant Pathology :1-16. 10.1007/s13313-024-00992-6
Ribeiro MF, Cavallini G, Solce GN, Favoreto AL, Passos JRDS, Hurley BP, Wilcken CF. (2024) Polyandry contributes to Gonipterus platensis (Coleoptera: Curculionidae) rearing. PeerJ 12:e17929. 10.7717/peerj.17929
Basson RJ, Roets F, Wingfield MJ, Aylward J. (2024) Bark beetles and their associated fungi infesting native Widdringtonia species in the Western Cape province of South Africa. African Entomology 32(e18505) 10.17159/2254-8854/2024/a18505
Solís M, Naidoo S, Wingfield MJ, Joubert J, Hammerbacher A. (2024) First line of defence: Eucalyptus leaf waxes influence infection by an aggressive fungal leaf pathogen. Plant Biology 10.1111/plb.13707
Nsibo DL, Barnes I, Berger DK. (2024) Recent advances in the population biology and management of maize foliar fungal pathogens Exserohilum turcicum, Cercospora zeina and Bipolaris maydis in Africa. Frontiers in Plant Science 15:1-23. https://doi.org/10.3389/fpls.2024.1404483
Lynn KMT, Wingfield MJ, Hammerbacher A, Barnes I. (2024) High-resolution melting curve analysis: A detection assay for Ceratocystis eucalypticola and C. manginecans in infected Eucalyptus. Fungal Biology 10.1016/j.funbio.2024.07.011 PDF
Yurkov A, Visagie CM, Crous PW, Hashimoto A, Baschien C, Begerow D, Kemler M, Schoutteten N, Stadler M, Wijayawardene NN, Hyde KD, Zhang N, Boekhout T, Group IYW, May TW, Thines M, Hawksworth DL. (2024) Cultures as types and the utility of viable specimens for fungal nomenclature. IMA Fungus 15:20. 10.1186/s43008-024-00155-8
Twiddy D, Fouché A, Akinsanmi OA, Fourie G. (2024) Biology and pathogenicity of fungi causing husk rot of macadamia in South Africa. European Journal of Plant Pathology :1-18. 10.1007/s10658-024-02915-z
Liu QL, Wingfield MJ, Duong TA, Wingfield BD, Chen SF. (2024) Diversity of Calonectria species from leaves and soils in diseased southern China Eucalyptus plantation. Fungal Biology 128:2007-2021. 10.1016/j.funbio.2024.07.007
Visagie CM, Yilmaz N, Allison JD, Barreto RW, Boekhout T, Boers J, Delgado MA, Dewing C, Fitza KNE, Furtado ECA, Gaya E, Hill R, Hobden A, Hu DM, Hülsewig T, Khonsanit A, Luangsa-Ard JJ, Mthembu A, Pereira CM, Price J-L, Pringle A, Qikani N, Sandoval-Denis M, Shumacher RK, Seifert KA, Slippers B, Tennakoon DS, Thanakitpipattana D, vanVuuren N, Groenewald JZ, Crous PW. (2024) New and Interesting Fungi. 7.. Fungal Systematics and Evolution 13:441–494. 10.3114/fuse.2024.13.12 PDF