Avocado branch canker is a fungal disease that affects avocado trees, caused by various species within the Botryosphaeriaceae family. It typically manifests as lesions or cankers on the tree's branches, often leading to dieback of affected branches and a decline in tree health. The disease can result in significant economic losses for avocado growers due to reduced yield and tree mortality.

These species are associated with disease symptoms such as leaf spot, stem or trunk canker, dieback, and fruit rot. Initial symptoms may include the formation of small, sunken lesions on the branches, which gradually enlarge and become necrotic. Cankers may girdle branches, leading to dieback. Infected trees may exhibit wilting, leaf drop, and overall decline in vigor. Cankers associated with species from the Botryosphaeriaceae family are necrotic with a friable bark that often has a whitish hard exudate, when the canker is cut open, it is discoloured (reddish brown). The cankers are characterized by V-shaped discoloration towards xylem tissues.

Factors Contributing to Disease Development: Environmental factors such as high humidity, rainfall, and wounds from pruning or mechanical damage can predispose avocado trees to infection. Additionally, stress factors like drought or nutrient deficiencies may exacerbate the severity of the disease.

Management strategies for avocado branch canker typically involve cultural practices to promote tree health and minimize stress, such as proper irrigation and fertilization. Additionally, pruning practices to remove infected branches can help reduce disease spread.

Overall, avocado branch canker poses a significant challenge to avocado growers, requiring proactive management strategies to mitigate its impact on orchard productivity and tree health. Ongoing research into disease epidemiology, host-pathogen interactions, and integrated pest management approaches is essential for effective disease control in avocado cultivation.

The ARP aims to:

  • Identify Botryosphaeriaceae species associated with branch canker and die-back on avocado trees in South African orchards and nurseries.

  • Find the most prevalent Botryosphaeriaceae species in South African avocado nurseries and orchards.

  • Evaluate the pathogenicity of the Botryosphaeriaceae species against commercial-grown avocado varieties in South Africa.

  • Evaluate the impact of drought stress on avocado branch canker symptom development.

 

ARP Team Members

Makhosazana (Khosi) Ngema

Heike Möller


 Images from left to right: 1-3. Wedge shape discoloration caused by Botryosphaeria species.

 

New Publications

D’Angelo D, Hu H, Lahoz E, Risteski J, Steenkamp E T, Viscardi M, van der Nest M A, Wu Y, Yu H, Zhou J, Karandeni Dewage C S, Kotta-Loizou L I, Stotz H U, Fitt B D L, Huang Y, Hu Y, Kiss L, Sorrentino R, Nkomo T, Zhou X, Vaghefi N, Sonnekus B, Bose T, Cerrato D, Cozzolino L, Creux N, D’Agostino N, Fourie G, Fusco G, Hammerbacher A, Idnurm A, Wingfield BD. (2025) IMA GENOME - F20 A draft genome assembly of Agroathelia rolfsii, Ceratobasidium papillatum, Pyrenopeziza brassicae, Neopestalotiopsis macadamiae, Sphaerellopsis filum and genomic resources for Colletotrichum spaethianum and Colletotrichum fructicola. IMA Fungus 16:e141732. 10.3897/imafungus.16.141732
Harvey A, van den Berg N, Swart V. (2025) In silico characterisation of the avocado WAK/WAKL gene family with a focus on genes involved in defence against Phytophthora cinnamomi. Frontiers in Plant Science 15:1474781. 10.3389/fpls.2024.1474781 PDF
Harvey A, van den Berg N, Swart V. (2024) Describing and characterizing the WAK/WAKL gene family across plant species: a systematic review. Frontiers in Plant Science 15:1467148. 10.3389/fpls.2024.1467148 PDF
Hlongwane NL, Dzomba EF, Hadebe K, van der Nest MA, Pierneef R, Muchadeyi FC. (2024) Identification of signatures of positive selection that have shaped the genomic landscape of South African pig populations. Animals 14:235. 10.3390/ani14020236
De Vos L, van der Nest MA, Santana QC, van Wyk S, Leeuwendaal KS, Wingfield BD, Steenkamp ET. (2024) Chromosome-level assemblies for the pine pitch canker pathogen Fusarium circinatum. Pathogens 13(1):70. 10.3390/pathogens13010070